The extended abstract of the presentation is here – PDF. It will be given at Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining, 2008, Center for Bio-Image Informatics, UCSB, Santa Barbara, CA, USA, January 17-18, 2008. We will be testing cellAnalyst now. More updates to come.

BTW, counting objects is by its nature a topological issue. So, from the topological point of view there shouldn’t the word ‘topological’ in the title!

Update: cellAnalyst can be downloaded at cellAnalyst.net.